First increment of the clinical reporting feature (see docs/requirements-reporting.md and docs/design-reporting.md): moves the existing live view to pages/1_Live.py, adds a password gate since the dashboard URL will be shared with the diabetes team, adds fetch_entries_range/fetch_treatments_range for multi-day report queries, and adds reporting.py with the core clinical calculations (GMI, %CV, 5-band time-in-range, hypo/hyper event detection per the Battelino et al. 2019 persistence rule). No report pages wired up yet — that's next. Co-Authored-By: Claude Sonnet 5 <[email protected]>
172 lines
6.1 KiB
Python
172 lines
6.1 KiB
Python
"""
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Nightscout API client.
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Praat met een bestaande Nightscout-instantie (CGM-data, insuline/koolhydraten
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en pomp-/sensorwissels). Authenticatie loopt via environment variables:
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- NIGHTSCOUT_URL: basis-URL van je Nightscout-instantie, bijv.
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"https://jouw-nightscout.example.com" (verplicht).
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- NIGHTSCOUT_TOKEN: een Nightscout API-token (rol-gebaseerd), OF
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- NIGHTSCOUT_API_SECRET: het "API secret" van je instantie (wordt lokaal
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ge-hashed, nooit in plaintext verstuurd).
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Gebruik precies één van de twee auth-opties; als beide gezet zijn heeft het
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token voorrang.
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"""
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from __future__ import annotations
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import hashlib
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import os
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from datetime import date, datetime, time, timedelta, timezone
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import pandas as pd
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import requests
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MGDL_PER_MMOL = 18.0182
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INSULIN_EVENT_TYPES = {"Bolus", "Meal Bolus", "Correction Bolus", "Combo Bolus", "SMB"}
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SITE_CHANGE_EVENT_TYPES = {"Site Change"}
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SENSOR_CHANGE_EVENT_TYPES = {"Sensor Change", "Sensor Start"}
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_REQUEST_TIMEOUT = 10
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class NightscoutConfigError(RuntimeError):
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"""NIGHTSCOUT_URL ontbreekt of is ongeldig."""
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def mgdl_to_mmol(value: float) -> float:
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"""Reken mg/dL (Nightscout's interne eenheid) om naar mmol/L."""
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return round(value / MGDL_PER_MMOL, 1)
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def _base_url() -> str:
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url = os.environ.get("NIGHTSCOUT_URL", "").strip().rstrip("/")
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if not url:
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raise NightscoutConfigError(
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"NIGHTSCOUT_URL is niet ingesteld. Zet deze environment variable, "
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"bijv. https://jouw-nightscout.example.com"
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)
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return url
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def _auth() -> tuple[dict, dict]:
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"""Geeft (headers, params) terug voor authenticatie met Nightscout."""
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token = os.environ.get("NIGHTSCOUT_TOKEN", "").strip()
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api_secret = os.environ.get("NIGHTSCOUT_API_SECRET", "").strip()
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if token:
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return {}, {"token": token}
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if api_secret:
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hashed = hashlib.sha1(api_secret.encode("utf-8")).hexdigest()
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return {"API-SECRET": hashed}, {}
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return {}, {}
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def _get(path: str, params: dict) -> list:
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headers, auth_params = _auth()
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response = requests.get(
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f"{_base_url()}{path}",
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headers=headers,
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params={**params, **auth_params},
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timeout=_REQUEST_TIMEOUT,
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)
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response.raise_for_status()
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return response.json()
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def _entries_since(since: datetime, count: int, until: datetime | None = None) -> pd.DataFrame:
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"""Haal entries op sinds `since` (en optioneel tot `until`), lokaal gefilterd.
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Nightscout geeft resultaten terug in aflopende volgorde; vraag ruim genoeg
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entries op (CGM meet doorgaans elke 5 min) en filter lokaal op tijd. Dit is
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robuuster dan server-side find[]-query's, die niet op elke Nightscout-versie
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identiek werken.
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"""
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data = _get("/api/v1/entries/sgv.json", {"count": count})
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if not data:
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return pd.DataFrame(columns=["timestamp", "mmol"])
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df = pd.DataFrame(data)
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df["timestamp"] = pd.to_datetime(df["date"], unit="ms", utc=True).dt.tz_localize(None)
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df["mmol"] = df["sgv"].astype(float).apply(mgdl_to_mmol)
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df = df[df["timestamp"] >= since.replace(tzinfo=None)]
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if until is not None:
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df = df[df["timestamp"] <= until.replace(tzinfo=None)]
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return df[["timestamp", "mmol"]].sort_values("timestamp").reset_index(drop=True)
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def _treatments_since(since: datetime, count: int, until: datetime | None = None) -> pd.DataFrame:
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"""Haal treatments op sinds `since` (en optioneel tot `until`), lokaal gefilterd."""
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data = _get("/api/v1/treatments.json", {"count": count})
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if not data:
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return pd.DataFrame(columns=["timestamp", "eventType", "insulin", "carbs"])
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df = pd.DataFrame(data)
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df["timestamp"] = pd.to_datetime(df["created_at"], utc=True).dt.tz_localize(None)
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for col in ("insulin", "carbs"):
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if col not in df.columns:
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df[col] = pd.NA
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df[col] = pd.to_numeric(df[col], errors="coerce")
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if "eventType" not in df.columns:
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df["eventType"] = ""
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df = df[df["timestamp"] >= since.replace(tzinfo=None)]
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if until is not None:
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df = df[df["timestamp"] <= until.replace(tzinfo=None)]
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return (
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df[["timestamp", "eventType", "insulin", "carbs"]]
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.sort_values("timestamp")
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.reset_index(drop=True)
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)
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def fetch_entries(hours: int = 24) -> pd.DataFrame:
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"""Haal glucosemetingen (SGV) op van de laatste `hours` uur, in mmol/L.
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Geeft een DataFrame terug met kolommen 'timestamp' en 'mmol', oplopend
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gesorteerd op tijd.
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"""
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since = datetime.now(timezone.utc) - timedelta(hours=hours)
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count = max(300, hours * 15)
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return _entries_since(since, count)
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def fetch_treatments(hours: int = 24) -> pd.DataFrame:
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"""Haal behandelingen op van de laatste `hours` uur: insuline, koolhydraten
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en pomp-/sensorwissels.
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Geeft een DataFrame terug met kolommen 'timestamp', 'eventType',
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'insulin' en 'carbs' (de laatste twee NaN waar niet van toepassing).
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"""
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since = datetime.now(timezone.utc) - timedelta(hours=hours)
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count = max(200, hours * 10)
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return _treatments_since(since, count)
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def fetch_entries_range(start_date: date, end_date: date) -> pd.DataFrame:
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"""Haal glucosemetingen op tussen start_date en end_date (beide inclusief).
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Bedoeld voor meerdaagse rapportages (bijv. 90 dagen) waarbij het
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uren-schalende `fetch_entries` niet praktisch is. Zelfde kolommen als
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`fetch_entries`.
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"""
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since = datetime.combine(start_date, time.min, tzinfo=timezone.utc)
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until = datetime.combine(end_date, time.max, tzinfo=timezone.utc)
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days = (end_date - start_date).days + 1
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count = min(days * 300, 100_000) # ruime marge boven 5-min-interval
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return _entries_since(since, count, until)
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def fetch_treatments_range(start_date: date, end_date: date) -> pd.DataFrame:
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"""Haal behandelingen op tussen start_date en end_date (beide inclusief).
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Zelfde kolommen als `fetch_treatments`.
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"""
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since = datetime.combine(start_date, time.min, tzinfo=timezone.utc)
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until = datetime.combine(end_date, time.max, tzinfo=timezone.utc)
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days = (end_date - start_date).days + 1
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count = min(days * 50, 50_000)
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return _treatments_since(since, count, until)
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