Merge pull request 'Samenvatting + AGP Profiel pages (FR2, FR3, FR9)' (#7) from dev into main
This commit was merged in pull request #7.
This commit is contained in:
@@ -0,0 +1,76 @@
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import requests
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import streamlit as st
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from auth import require_auth
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from nightscout_client import NightscoutConfigError
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from reporting import (
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gmi_percent,
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percent_cv,
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sensor_active_percent,
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tir_breakdown_5band,
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)
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from ui_common import load_range_data, select_period_days
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st.set_page_config(page_title="Glucose dashboard — Samenvatting", page_icon="📊", layout="wide")
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require_auth()
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st.title("Samenvatting")
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st.caption("AGP-stijl samenvattingsstatistieken over een gekozen periode (FR2, FR9).")
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start, end, days = select_period_days(default_label="90 dagen")
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try:
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glucose, _treatments = load_range_data(start, end)
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except NightscoutConfigError as exc:
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st.error(str(exc))
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st.stop()
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except (requests.RequestException, ValueError) as exc:
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st.error(f"Kon geen data ophalen van Nightscout: {exc}")
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st.stop()
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if glucose.empty:
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st.info("Geen glucosemetingen gevonden in deze periode.")
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st.stop()
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active_pct = sensor_active_percent(glucose, start, end)
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if active_pct < 70:
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st.warning(
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f"Slechts {active_pct:.0f}% sensordekking in deze periode (streefwaarde ≥70%). "
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"De onderstaande cijfers zijn mogelijk minder betrouwbaar door de vele hiaten."
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)
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mean_mmol = glucose["mmol"].mean()
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gmi = gmi_percent(mean_mmol)
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cv = percent_cv(glucose)
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tir = tir_breakdown_5band(glucose)
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st.subheader("Kerncijfers")
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col1, col2, col3, col4 = st.columns(4)
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col1.metric("Sensordekking", f"{active_pct:.0f}%", help="Streefwaarde: ≥70%")
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col2.metric("Gemiddelde glucose", f"{mean_mmol:.1f} mmol/L")
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col3.metric("Geschat HbA1c (GMI)", f"{gmi:.1f}%", help="Bergenstal et al. 2018 — geen labwaarde")
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col4.metric("Variabiliteit (%CV)", f"{cv:.0f}%", help="Streefwaarde: ≤36%")
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st.subheader("Tijd in bereik (5 klinische banden)")
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band_labels = {
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"very_low": "Zeer laag (<3.0)",
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"low": "Laag (3.0-3.9)",
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"in_range": "In bereik (3.9-10.0)",
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"high": "Hoog (10.0-13.9)",
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"very_high": "Zeer hoog (>13.9)",
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}
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band_targets = {
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"very_low": "<1%",
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"low": "<4% (samen met zeer laag)",
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"in_range": ">70%",
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"high": "<25% (samen met zeer hoog)",
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"very_high": "<5%",
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}
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cols = st.columns(5)
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for col, band in zip(cols, band_labels, strict=True):
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col.metric(band_labels[band], f"{tir[band]:.0f}%", help=f"Streefwaarde: {band_targets[band]}")
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st.caption(
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f"Periode: {start.strftime('%d-%m-%Y')} t/m {end.strftime('%d-%m-%Y')} "
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f"({len(glucose)} metingen) · streefwaarden volgens Battelino et al. 2019"
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)
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@@ -0,0 +1,100 @@
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import plotly.graph_objects as go
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import requests
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import streamlit as st
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from auth import require_auth
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from data_processing import TARGET_HIGH, TARGET_LOW
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from nightscout_client import NightscoutConfigError
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from reporting import agp_percentile_bands
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from ui_common import get_colors, hex_to_rgba, load_range_data, select_period_days
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st.set_page_config(page_title="Glucose dashboard — AGP profiel", page_icon="📊", layout="wide")
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require_auth()
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st.title("AGP profiel")
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st.caption(
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"Percentielgrafiek over een samengesteld 24-uursbeeld (FR3) — de 5e/25e/50e/75e/"
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"95e percentiel van alle metingen op elk tijdstip van de dag in de gekozen periode."
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)
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start, end, days = select_period_days(default_label="90 dagen")
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try:
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glucose, _treatments = load_range_data(start, end)
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except NightscoutConfigError as exc:
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st.error(str(exc))
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st.stop()
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except (requests.RequestException, ValueError) as exc:
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st.error(f"Kon geen data ophalen van Nightscout: {exc}")
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st.stop()
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if glucose.empty:
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st.info("Geen glucosemetingen gevonden in deze periode.")
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st.stop()
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bands = agp_percentile_bands(glucose, bin_minutes=30)
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colors = get_colors()
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hours = bands["minute_of_day"] / 60
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fig = go.Figure()
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fig.add_hrect(y0=TARGET_LOW, y1=TARGET_HIGH, fillcolor=colors["band"], line_width=0, layer="below")
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# 5e-95e percentiel als brede, lichte band.
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fig.add_trace(
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go.Scatter(x=hours, y=bands["p95"], mode="lines", line={"width": 0}, showlegend=False, hoverinfo="skip")
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)
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fig.add_trace(
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go.Scatter(
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x=hours,
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y=bands["p5"],
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mode="lines",
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line={"width": 0},
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fill="tonexty",
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fillcolor=colors["band"],
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name="5e-95e percentiel",
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hoverinfo="skip",
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)
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)
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# 25e-75e percentiel als smallere, donkerdere band.
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fig.add_trace(
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go.Scatter(x=hours, y=bands["p75"], mode="lines", line={"width": 0}, showlegend=False, hoverinfo="skip")
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)
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fig.add_trace(
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go.Scatter(
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x=hours,
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y=bands["p25"],
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mode="lines",
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line={"width": 0},
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fill="tonexty",
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fillcolor=hex_to_rgba(colors["glucose"], 0.3),
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name="25e-75e percentiel",
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hoverinfo="skip",
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)
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)
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# Mediaan.
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fig.add_trace(
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go.Scatter(
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x=hours,
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y=bands["p50"],
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mode="lines",
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line={"color": colors["glucose"], "width": 2},
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name="Mediaan",
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hovertemplate="%{x:.0f}u · %{y:.1f} mmol/L<extra></extra>",
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)
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)
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fig.update_layout(
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paper_bgcolor="rgba(0,0,0,0)",
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plot_bgcolor="rgba(0,0,0,0)",
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font_color=colors["text"],
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legend={"orientation": "h", "yanchor": "bottom", "y": 1.02, "xanchor": "left", "x": 0},
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margin={"l": 10, "r": 10, "t": 10, "b": 10},
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height=480,
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yaxis={"title": "mmol/L", "gridcolor": colors["grid"], "zeroline": False},
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xaxis={"title": "Uur van de dag", "gridcolor": colors["grid"], "tickmode": "linear", "dtick": 2},
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)
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st.plotly_chart(fig, width="stretch")
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st.caption(
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f"Periode: {start.strftime('%d-%m-%Y')} t/m {end.strftime('%d-%m-%Y')} ({len(glucose)} metingen)"
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)
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@@ -202,3 +202,27 @@ def summarize_events(events: pd.DataFrame, period_days: float) -> dict[str, floa
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"total_minutes": round(total_minutes, 1),
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"total_minutes": round(total_minutes, 1),
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"events_per_week": round(len(events) / period_days * 7, 1),
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"events_per_week": round(len(events) / period_days * 7, 1),
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}
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}
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AGP_PERCENTILE_COLUMNS = ["minute_of_day", "p5", "p25", "p50", "p75", "p95"]
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def agp_percentile_bands(glucose: pd.DataFrame, bin_minutes: int = 30) -> pd.DataFrame:
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"""Aggregeer glucosewaarden per tijdstip-van-de-dag naar percentielbanden.
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Groepeert alle metingen in de periode naar hun tijd-van-de-dag (in bins
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van `bin_minutes`), en berekent per bin de 5e/25e/50e/75e/95e percentiel
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— de standaard AGP-percentielgrafiek over een samengesteld 24-uursbeeld
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(Danne et al. 2017, Diabetes Care 40(12):1631-1640).
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"""
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if glucose.empty:
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return pd.DataFrame(columns=AGP_PERCENTILE_COLUMNS)
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df = glucose.copy()
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minute_of_day = df["timestamp"].dt.hour * 60 + df["timestamp"].dt.minute
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df["bin"] = (minute_of_day // bin_minutes) * bin_minutes
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grouped = df.groupby("bin")["mmol"].quantile([0.05, 0.25, 0.5, 0.75, 0.95]).unstack()
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grouped.columns = ["p5", "p25", "p50", "p75", "p95"]
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grouped = grouped.reset_index().rename(columns={"bin": "minute_of_day"})
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return grouped[AGP_PERCENTILE_COLUMNS].sort_values("minute_of_day").reset_index(drop=True)
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@@ -2,6 +2,7 @@ import pandas as pd
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import pytest
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import pytest
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from reporting import (
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from reporting import (
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agp_percentile_bands,
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detect_events,
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detect_events,
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gmi_percent,
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gmi_percent,
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minutes_per_day,
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minutes_per_day,
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@@ -213,6 +214,35 @@ def test_summarize_events_computes_expected_stats():
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assert result["events_per_week"] == pytest.approx(2.0)
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assert result["events_per_week"] == pytest.approx(2.0)
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def test_agp_percentile_bands_groups_by_time_of_day_across_days():
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# zelfde tijdstip (08:00) op twee verschillende dagen, met bekende waarden
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glucose = _series(
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[
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("2026-01-01 08:00", 6.0),
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("2026-01-02 08:00", 8.0),
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("2026-01-01 20:00", 10.0),
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("2026-01-02 20:00", 10.0),
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]
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)
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result = agp_percentile_bands(glucose, bin_minutes=30)
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assert list(result.columns) == ["minute_of_day", "p5", "p25", "p50", "p75", "p95"]
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morning_bin = 8 * 60
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row = result[result["minute_of_day"] == morning_bin].iloc[0]
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assert row["p50"] == pytest.approx(7.0) # mediaan van 6.0 en 8.0
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evening_bin = 20 * 60
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evening_row = result[result["minute_of_day"] == evening_bin].iloc[0]
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assert evening_row["p50"] == pytest.approx(10.0)
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def test_agp_percentile_bands_handles_empty_input():
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empty = pd.DataFrame(columns=["timestamp", "mmol"])
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result = agp_percentile_bands(empty)
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assert result.empty
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assert list(result.columns) == ["minute_of_day", "p5", "p25", "p50", "p75", "p95"]
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def test_summarize_events_handles_empty_input():
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def test_summarize_events_handles_empty_input():
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empty = pd.DataFrame(columns=["start", "end", "duration_minutes"])
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empty = pd.DataFrame(columns=["start", "end", "duration_minutes"])
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result = summarize_events(empty, period_days=14)
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result = summarize_events(empty, period_days=14)
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@@ -0,0 +1,9 @@
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from ui_common import hex_to_rgba
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def test_hex_to_rgba_converts_correctly():
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assert hex_to_rgba("#2a78d6", 0.3) == "rgba(42,120,214,0.3)"
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def test_hex_to_rgba_handles_hash_optional():
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assert hex_to_rgba("2a78d6", 0.3) == "rgba(42,120,214,0.3)"
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@@ -8,10 +8,19 @@ worden per pagina.
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from __future__ import annotations
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from __future__ import annotations
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from datetime import date, datetime, timedelta, timezone
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import streamlit as st
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import streamlit as st
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from nightscout_client import fetch_entries_range, fetch_treatments_range
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MMOL_HOVERTEMPLATE = "%{x|%d-%m %H:%M} · %{y:.1f} mmol/L<extra></extra>"
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MMOL_HOVERTEMPLATE = "%{x|%d-%m %H:%M} · %{y:.1f} mmol/L<extra></extra>"
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# Periode-opties voor de rapportagepagina's (FR1): elke pagina kiest zijn eigen
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# standaard (90 dagen voor statistiek/TIR, 14 dagen voor recente
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# glucosegrafieken) via `default_label`.
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PERIOD_OPTIONS_DAYS = {"14 dagen": 14, "30 dagen": 30, "90 dagen": 90}
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# Kleuren per rol, licht/donker — categorale kleuren voor identiteit
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# Kleuren per rol, licht/donker — categorale kleuren voor identiteit
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# (glucose/insuline/carbs), status-kleuren (vast, nooit hergebruikt) voor
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# (glucose/insuline/carbs), status-kleuren (vast, nooit hergebruikt) voor
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# te laag/te hoog.
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# te laag/te hoog.
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@@ -47,6 +56,13 @@ PALETTE = {
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}
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}
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def hex_to_rgba(hex_color: str, alpha: float) -> str:
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"""Zet een '#rrggbb'-kleur om naar een 'rgba(r,g,b,a)'-string voor Plotly-fills."""
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hex_color = hex_color.lstrip("#")
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r, g, b = (int(hex_color[i : i + 2], 16) for i in (0, 2, 4))
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return f"rgba({r},{g},{b},{alpha})"
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def get_colors() -> dict:
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def get_colors() -> dict:
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"""Geef de kleurenset terug die past bij het actieve Streamlit-thema."""
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"""Geef de kleurenset terug die past bij het actieve Streamlit-thema."""
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theme_type = "light"
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theme_type = "light"
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@@ -55,3 +71,25 @@ def get_colors() -> dict:
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except AttributeError:
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except AttributeError:
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pass
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pass
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return PALETTE["dark" if theme_type == "dark" else "light"]
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return PALETTE["dark" if theme_type == "dark" else "light"]
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def select_period_days(default_label: str) -> tuple[date, date, int]:
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"""Periodekiezer voor rapportagepagina's; geeft (start, eind, aantal_dagen) terug."""
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labels = list(PERIOD_OPTIONS_DAYS.keys())
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label = st.radio("Periode", labels, index=labels.index(default_label), horizontal=True)
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days = PERIOD_OPTIONS_DAYS[label]
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end = datetime.now(tz=timezone.utc).date()
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start = end - timedelta(days=days - 1)
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return start, end, days
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@st.cache_data(ttl=3600, show_spinner="Data ophalen van Nightscout...")
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def load_range_data(start: date, end: date):
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"""Gecachete Nightscout-fetch voor een vaste periode.
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Lange TTL (in tegenstelling tot de 60s van de live-pagina): historische
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data van een afgeronde periode verandert niet.
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"""
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glucose = fetch_entries_range(start, end)
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treatments = fetch_treatments_range(start, end)
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return glucose, treatments
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Block a user